Periodic zone-MPC with asymmetric costs for outpatient-ready safety of an artificial pancreas to treat type 1 diabetes.

R. Gondhalekar, E. Dassau, and F.J. Doyle III. “Periodic zone-MPC with asymmetric costs for outpatient-ready safety of an artificial pancreas to treat type 1 diabetes.” Automatica 71: 237-246, 2016. doi:10.1016/j.automatica.2016.04.015

Outcome Measures for Artificial Pancreas Clinical Trials: A Consensus Report.

D.M. Maahs, B.A. Buckingham, J.R. Castle, A. Cinar, E.R. Damiano, E. Dassau, J.H. DeVries, F.J. Doyle III, S.C. Griffen, A. Haidar, L. Heinemann, R. Hovorka, T.W. Jones, C. Kollman, B. Kovatchev, B.L. Levy, R. Nimri, D.N. O’Neal, M. Philip, E. Renard, S.J. Russell, S.A. Weinzimer, H. Zisser, J.W. Lum. Diabetes Care. 39(7):1175-9, 2016. doi: 10.2337/dc15-2716. Review.

Preliminary Evaluation of a Long-Term Intraperitoneal Glucose Sensor With Flushing Mechanism.

L.M. Huyett, R. Mittal, H.C. Zisser, E.S. Luxon, A. Yee, E. Dassau, F.J. Doyle III, D.R. Burnett.
J Diabetes Sci Technol. 2016. doi:10.1177/1932296816640542

Randomized Crossover Comparison of Personalized MPC and PID Control Algorithms for the Artificial Pancreas.

J.E. Pinsker, J.B. Lee, E. Dassau, D.E. Seborg, P.K. Bradley, R. Gondhalekar, W.C. Bevier, L. Huyett, H.C. Zisser, F.J. Doyle III. Diabetes Care, 39(7): 1135-42, 2016. doi: 10.2337/dc15-2344.

Functional network inference of the suprachiasmatic nucleus

J.H. Abel, K. Meeker, D. Granados-Fuentes, P.C. St. John, T.J. Wang, B.B. Bales, F.J. Doyle III, E.D. Herzog, L.R. Petzold. “Functional network inference of the suprachiasmatic nucleus.” Proceedings of the National Academy of Sciences of the United States of America, 113(16), 2016. doi:10.1073/pnas.1521178113

Adjustment of open-loop settings to improve closed-loop results in type 1 diabetes: a multicenter randomized trial

E. Dassau, S.A. Brown, A. Basu, J.E. Pinsker, Y.C. Kudva, R. Gondhalekar, S. Patek, D. Lv, M. Schiavon, J.B. Lee, C.D. Man, L. Hinshaw, K. Castorino, A. Mallad, V. Dadlani, S.K. McCrady-Spitzer, M. McElwee-Malloy, C.A. Wakeman, W.C. Bevier, P.K. Bradley, B. Kovatchev, C. Cobelli, H.C. Zisser, F.J. Doyle III, “Adjustment of open-loop settings to improve closed-loop results in type 1 diabetes: a multicenter randomized trial,” The Journal of Clinical Endocrinology & Metabolism, vol. 100, no. 10, pp. 3878-3886, July 2015. [DOI]

A Coupled Stochastic Model Explains Differences in Cry Knockout Behavior

J.H. Abel, L.A. Widmer, P.C. St. John, J. Stelling, and F.J. Doyle III, ”
A Coupled Stochastic Model Explains Differences in Cry Knockout Behavior.” IEEE Life Sciences Letters, Jun 2015. doi:10.1109/LLS.2015.2439498

Quantifying Stochastic Noise in Cultured Circadian Reporter Cells.

St John PC, Doyle FJ III.
PLoS Comput Biol. 2015 Nov 20;11(11):e1004451. doi: 10.1371/journal.pcbi.1004451.

Systems biology approach to understanding post-traumatic stress disorder

G.S. Thakur, B.J. Daigle Jr, K.R. Dean, Y. Zhang, M. Rodriguez-Fernandez, R. Hammamieh, R. Yang, M. Jett, J. Palma, L.R. Petzold, F.J. Doyle III, “Systems biology approach to understanding post-traumatic stress disorder,” Molecular bioSystems, Jan 2015. [DOI]

Amplitude metrics for cellular circadian bioluminescence reporters

P.C. St John, S.R. Taylor, J.H. Abel, F.J. Doyle III, “Amplitude metrics for cellular circadian bioluminescence reporters,” Biophysical Journal, vol. 107, no. 11, pp. 2712-22,Dec 2014. [DOI]